昆虫学报 ›› 2025, Vol. 68 ›› Issue (4): 407-420.doi: 10.16380/j.kcxb.2025.04.004

• 研究论文 • 上一篇    下一篇

意大利蜜蜂去甲基化酶ALKBH基因家族的生物信息学分析、表达模式及功能验证

李一平1, 孙长露2, 张伟3, 王妙2,*, 黄少康1,4,*   

  1. (1. 福建农林大学蜂学与生物医药学院, 福州 350002; 2. 中国农业科学院蜜蜂研究所, 资源昆虫高效养殖与利用全国重点实验室, 北京 100093; 3. 中国农业大学理学院应用化学系, 北京 100193; 4. 农业农村部(福建)蜜蜂生物学观测站, 福州 350002)
  • 出版日期:2025-04-20 发布日期:2025-05-22

Bioinformatics analysis, expression profiling and functional verification of the demethylase ALKBH gene family in Apis mellifera ligustica (Hymenoptera: Apidae)

LI Yi-Ping1, SUN Chang-Lu2, ZHANG Wei3, WANG Miao2,*, HUANG Shao-Kang1,4,*   

  1.  (1. College of Bee Science and Biomedicine, Fujian Agriculture and Forestry University, Fuzhou 350002, China; 2. State Key Laboratory of Resource Insects, Institute of Apicultural Research, Chinese Academy of Agricultural Sciences, Beijing 100093, China; 3. Department of Applied Chemistry, College of Science, China Agricultural University, Beijing 100193, China; 4. Honey Bee Biology Observation Station, Ministry of Agriculture and Rural Affairs (Fujian), Fuzhou 350002, China)
  • Online:2025-04-20 Published:2025-05-22

摘要: 【目的】 本研究旨在探究意大利蜜蜂Apis mellifera ligustica去甲基化酶AmALKBH基因对生长发育过程和mRNA甲基化的潜在调控作用,为深入开展AmALKBH的功能研究提供新理论基础和参考。【方法】使用多种软件对5个AmALKBH基因(AmALKBH1, AmALKBH4, AmALKBH6, AmALKBH7及AmALKBH8)进行生物信息学分析,并进行多物种间的同源序列比对和系统进化树构建。利用qRTPCR检测5个AmALKBH基因(AmALKBH1, AmALKBH4, AmALKBH6, AmALKBH7及AmALKBH8)在意大利蜜蜂不同发育阶段(卵、幼虫和蛹),1, 7和18日龄成年工蜂脑中以及1日龄成年工蜂不同组织(触角、脑、咽下腺、蜜囊、中肠、回肠、直肠、脂肪体和毒腺)中的表达量。同时利用高效液相色谱三重四级杆串联质谱(high performance liquid chromatography tandem triple quadrupole mass spectrometry, HPLC-QqQ-MS/MS)检测意大利蜜蜂以上不同发育阶段以及1, 7和18日龄成年工蜂脑样品中mRNA m6A甲基化的水平。【结果】意大利蜜蜂的5个AmALKBH基因(AmALKBH1, AmALKBH4, AmALKBH6, AmALKBH7和AmALKBH8)分别编码311, 297, 229, 228和585个氨基酸,具有共同的保守基序和结构域,均为亲水性的球形蛋白, 5个AmALKBH蛋白之间的理化性质存在差异。意大利蜜蜂的5个AmALKBHs与黑腹果蝇Drosophila melanogaster、智人Homo sapiens、家鼠Mus musculus、拟南芥Arabidopsis thaliana以及大肠杆菌Escherichia coli的ALKBH氨基酸序列一致性为12.92%~46.46%,与东方蜜蜂A. cerana、黄脚胡蜂Vespa velutina和欧洲熊蜂Bombus terrestris的ALKBH亲缘关系最紧密。随着卵期的胚胎发育进程,AmALKBH4和AmALKBH7的表达量逐渐降低,而AmALKBH6的表达量逐渐增高,AmALKBH8的表达量在卵中期(产卵后36 h)最高而后下降,AmALKBH1不表达;在幼虫期和蛹期,5个AmALKBH基因的表达量随发育进程逐渐提高,在褐眼白蛹和褐眼浅色蛹时达到峰值,在羽化出房前有所下降; 5个AmALKBH基因均显示出在意大利蜜蜂1日龄成年工蜂触角和脑中高表达; 1日龄成年工蜂脑中AmALKBH6, AmALKBH7和AmALKBH8的表达量均显著低于7和18日龄成年工蜂中的。mRNA m6A甲基化水平从卵前期到卵中期明显降低,在卵后期(产卵后60 h)显著提高;幼虫和蛹期mRNA m6A甲基化水平呈现与基因表达量相似的变化趋势,不同的是在粉眼白蛹时就较早地出现峰值,而mRNA m6A甲基化水平在1日龄成年工蜂脑中最高,在7和18日龄成虫年工蜂脑中降低。【结论】研究结果显示出ALKBH基因家族在各物种间的高度保守性,意大利蜜蜂的5个AmALKBH基因之间在序列特征、蛋白结构和表达模式上均存在差异,预示其各自具有功能特点。AmALKBH基因表达量和mRNA m6A甲基化水平均随发育阶段出现动态变化,且二者之间存在一定关联,表明AmALKBH基因对意大利蜜蜂生长发育具有潜在调控作用。以上研究结果为揭示AmALKBH基因调控生长发育的分子机制打下良好基础,为进一步提升蜜蜂在基础研究和授粉应用中的价值提供全新理论依据。

关键词: 意大利蜜蜂, ALKBH基因家族, 去甲基化酶, mRNA m6A甲基化, 发育阶段

Abstract: 【Aim】This study aims to explore the potential regulatory roles of the demethylase AmALKBH genes in Apis mellifera ligustica in the growth and developmental process and mRNA methylation, so as to provide the new theoretical basis and references for the further functional study of AmALKBHs. 【Methods】 Multiple software was used to bioinformatically analyze the five AmALKBH genes (AmALKBH1, AmALKBH4, AmALKBH6, AmALKBH7 and AmALKBH8), homologous sequence alignment was performed and phylogenetic tree of ALKBHs from different species was constructed. qRT-PCR was employed to examine the expression levels of these five AmALKBH genes in different developmental stages (egg, larva and pupa), brains of the 1-, 7- and 18-day-old adult workers, and various tissues (antennae, brain, hypopharyngeal gland, crop, midgut, ileum, rectum, fat body and venom gland) of the 1-day-old adult workers of A. m. ligustica. Additionally, high performance liquid chromatography tandem triple quadrupole mass spectrometry (HPLC-QqQ-MS/MS) was used to quantify the levels of mRNA m6A methylation in samples throughout the above different developmental stages and brains of the 1-, 7- and 18-day-old adult workers of A. m. ligustica. 【Results】The five AmALKBH genes (AmALKBH1, AmALKBH4, AmALKBH6, AmALKBH7 and AmALKBH8) in A. m. ligustica encode proteins of 311, 297, 229, 228 and 585 amino acids, respectively, with conserved motifs and structural domains, being hydrophilic spherical proteins. These five proteins are different in their physicochemical properties. The five AmALKBHs of A. m. ligustica exhibited 12.92%-46.46% amino acid sequence identities with ALKBHs of Drosophila melanogaster, Homo sapiens, Mus musculus, Arabidopsis thaliana and Escherichia coli, and showed the closest genetic relationships with ALKBHs from A. cerana, Vespa velutina, and  Bombus terrestris.Along with the embryonic development, there was a progressive reduction in the expression levels of AmALKBH4 and AmALKBH7, concomitant with an elevation in the expression level of AmALKBH6. The expression level of AmALKBH8 reached its peak in the middle stage of egg development (36 h post oviposition), and then declined thereafter. The expression of AmALKBH1 was undetectable. During the larval and pupal stages, the expression levels of all the five AmALKBH genes gradually increased with the developmental progress, reaching the peak in the brown-eyed white pupae and brown-eyed light-colored pupae before decreasing slightly in the newly emerged adults. These five AmALKBH genes were highly expressed in the antennae and brain of the 1-day-old adult workers of A. m. ligustica. The expression levels of AmALKBH6, AmALKBH7 and AmALKBH8 in the brains of the 1-day-old adult workers were significantly lower than those in the brains of the 7- and 18-day-old adult workers. An obvious decrease in the level of mRNA m6A methylation was observed from the early stage to middle stage of egg development, with a notable increase in the late stage of egg development (60 h post oviposition). The level of mRNA m6A methylation exhibited a similar trend as the gene expression level, peaking earlier in the pink-eyed white pupae. While the mRNA m6A methylation level was the highest in the brains of the 1-day-old adult workers but reduced in the brains of the 7- and 18-day-old adult workers. 【Conclusion】 This study result demonstrated the high conservation of the ALKBH gene family among species. Differences in the sequence characteristics, protein structure and expression patterns were observed among the five AmALKBH genes in A. m. ligustica, indicating their distinct functional features. The expression levels of AmALKBH genes and the levels of mRNA m6A methylation dynamically changed throughout the developmental stages of A. m. ligustica and were found to be correlated, suggesting a potential regulatory role of AmALKBH genes in the growth and development of A. m. ligustica. These findings lay a solid foundation for uncovering the molecular mechanisms, by which AmALKBH genes regulate growth and development, providing a new theoretical basis for further enhancing the value of honeybees in basic research and pollination applications.

Key words: Apis mellifera ligustica, ALKBH gene family, demethylase, mRNA m6A methylation, developmental stages