昆虫学报 ›› 2024, Vol. 67 ›› Issue (8): 1137-1146.doi: 10.16380/j.kcxb.2024.08.010

• 研究论文 • 上一篇    下一篇

四种缘蝽线粒体基因组的测序及基于线粒体基因组的缘蝽科系统发育分析

林兴雨, 宋南*, 尹新明*, 朱永强, 席玉强   

  1. (河南农业大学植物保护学院, 河南绿色害虫防治国际实验室, 河南害虫生物防治工程实验室, 郑州 450002)
  • 出版日期:2024-08-20 发布日期:2024-09-23

Sequencing of mitochondrial genomes in four coreid species (Hemiptera: Coreidae) and mitogenome-based phylogenetic analysis of Coreidae

LIN Xing-Yu, SONG Nan*, YIN Xin-Ming*, ZHU Yong-Qiang, XI Yu-Qiang   

  1.  (Henan International Laboratory for Green Pest Control, Henan Engineering Laboratory of Pest Biological Control, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China)
  • Online:2024-08-20 Published:2024-09-23

摘要: 【目的】利用线粒体基因组序列数据分析缘蝽科(Coreidae)亚科间的系统发育。【方法】使用高通量测序对4种缘蝽(纹须同缘蝽Homoeocerus striicornis、广腹同缘蝽H. dilatatus、宽棘缘蝽Cletus schmidti和褐莫缘蝽Molipteryx fuliginosa)进行低覆盖度全基因组测序;从获得的全基因组测序数据中重建线粒体基因组全序列;联合已经公布的缘蝽科3个亚科32个种的线粒体基因组序列(作为内群)以及蛛缘蝽科(Alydidae)中的3个种的线粒体基因组序列(作为外群),分别采用最大似然法和贝叶斯法重建缘蝽科亚科间的系统发育。【结果】纹须同缘蝽、广腹同缘蝽、宽棘缘蝽和褐莫缘蝽线粒体基因组(GenBank登录号: OR702557-OR702560)的长度分别为15 706, 15 913, 17 685和16 959 bp,新获得的这4种缘蝽线粒体基因组的基因排列方式与典型的昆虫线粒体基因组一致,没有基因重排等特殊的基因组织结构;此外,这4种缘蝽线粒体基因组的全基因组序列、蛋白质编码基因、 rRNA基因和tRNA基因序列都具有较高的A+T含量(≥70%)。最大似然法和贝叶斯法重建的缘蝽科系统发育树具有大体相同的拓扑结构;所有结果都支持缘蝽亚科(Coreinae)为单系群,缘蝽亚科与希缘蝽亚科(Hydarinae)互为姐妹群。【结论】本研究利用线粒体基因组数据重建了缘蝽科亚科间的系统发育,结果支持缘蝽亚科为单系群,缘蝽亚科与希缘蝽亚科互为姐妹群。本研究为进一步在系统发生框架内探讨缘蝽科的系统演化提供了线粒体系统发育基因组学数据。

关键词: 半翅目, 缘蝽总科, 缘蝽科, 线粒体基因组, 系统发育

Abstract: 【Aim】 To elucidate the phylogeny of subfamilies within the family Coreidae by analyzing the mitochondrial genome sequence data. 【Methods】 High-throughput sequencing was used to conduct low-coverage whole-genome sequencing of four coreid species (Homoeocerus striicornis, H. dilatatus, Cletus schmidti and Molipteryx fuliginosa). The complete mitochondrial genome sequences were reconstructed from the obtained whole-genome sequencing data. Combining with the published mitochondrial genome sequences of 32 species from three subfamilies of Coreidae (as ingroups) and three mitochondrial genome sequences from the family Alydidae (as outgroups), the phylogeny of subfamilies within Coreidae was reconstructed using both the maximum likelihood and Bayesian inference methods. 【Results】 The lengths of the mitochondrial genomes of H. striicornis, H. dilatatus, C. schmidti and M. fuliginosa (GenBank accession numbers: OR702557-OR702560) were 15 706, 15 913, 17 685 and 16 959 bp, respectively. The gene arrangements of the newly obtained mitochondrial genomes of the four coreid species were consistent with that of the typical insect mitochondrial genome, showing no gene rearrangement or other special genomic structural characteristics. Furthermore, the complete mitochondrial genome sequences, and the protein-coding gene, rRNA gene and tRNA gene sequences of the mitochondrial genomes of the four coreid species exhibited high A+T content (≥70%). The phylogenetic trees of Coreidae reconstructed using the maximum likelihood and Bayesian inference methods had a largely identical tree topology, supporting Coreinae as a monophyletic and a sister-group relationship between Coreinae and Hydarinae. 【Conclusion】 This study reconstructed the phylogeny of subfamilies within Coreidae using mitochondrial genome data. The results support the monophyletic group of the subfamily Coreinae and the sister relationship between Coreinae and Hydarinae. This study provides mitochondrial phylogenomic data for further exploration of the systematic evolution of Coreidae in a phylogenetic framework.

Key words:  Hemiptera, Coreoidea, Coreidae, mitochondrial genome, phylogeny