›› 2013, Vol. 56 ›› Issue (7): 724-728.doi:

• RESEARCH PAPERS • Previous Articles     Next Articles

High-throughput discovery of SSR genetic markers in the yellow mealworm beetle, Tenebrio molitor (Coleoptera: Tenebrionidae), from its transcriptome database (In English)

ZHU Jia-Ying1,*, WU Guo-Xing2, YANG Bin1   

  1. (1. Key Laboratory of Forest Disaster Warning and Control of Yunnan Province, Southwest Forestry University, Kunming 650224, China; 2. College of Plant Protection, Yunnan Agricultural University, Kunming 650201, China)
  • Online:2013-07-20 Published:2013-07-20

Abstract: Tenebrio molitor is a well known model insect. Although a lot of achievements have been made in many research aspects related to this insect, only very few molecular/genetic resources are available. In this study, a high-throughput method was used for discovering the simple sequence repeat (SSR) genetic markers from this beetle. In total, 1 249 SSR genetic markers were developed from the previously constructed trancriptome database. The majority of them contained mono-and trinucleotide motifs (44.44% and 41.15%, respectively), and A/T (42.70%) was the most abundant motif. Except for mononucleotide, the SSRs with five repeat units were the most common, with the frequency of 30.90%. Base on the identified SSRs, 1 004 pairs of primers were designed, of which a maximum of 5 pairs of alternative primers were designed from a single SSR. The SSRs identified here will constitute an important resource for marker-assisted investigation in functional and comparative genomics of T. molitor.

Key words: Tenebrio molitor, transcriptome, microsatellite, genetic marker, primer