昆虫学报 ›› 2024, Vol. 67 ›› Issue (6): 738-752.doi: 10.16380/j.kcxb.2024.06.002

• 研究论文 • 上一篇    下一篇

团花绢野螟成虫触角转录组及化学感受相关基因分析

董祥1, 陶瑜1, 苏钟琪1, 邓创创1, 谢雯其1, 陈志云2温秀军1, 林娜1,*, 马涛1,*   

  1. (1. 华南农业大学林学与风景园林学院, 广州 510642; 2. 中山市林业有害生物防治检疫站, 中山 528043)
  • 出版日期:2024-06-20 发布日期:2024-07-24

Analysis of the adult antennal transcriptome and chemosensory-related genes of Diaphania glauculalis (Lepidoptera: Pyralidae)

DONG Xiang1, TAO Yu1, SU Zhong-Qi1, DENG Chuang-Chuang1, XIE Wen-Qi1, CHEN Zhi-Yun2, WEN Xiu-Jun1, LIN Na1,*, MA Tao1,*   

  1.  (1. College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, China; 2. Forest Disease and Insect Control and Quarantine Station of Zhongshan City, Zhongshan 528043, China)
  • Online:2024-06-20 Published:2024-07-24

摘要: 【目的】本研究旨在通过建立团花绢野螟Diaphania glauculalis成虫触角转录组数据库,挖掘化学感受相关基因,为团花绢野螟成虫触角的化学感受机制及绿色防控技术提供理论基础。【方法】使用Illumina NovaSeq 6000平台对团花绢野螟成虫触角转录组进行测序,使用Trimmomatic和Trinity对测序所得的原始数据进行剪切、组装得到转录组数据;比对CDD, KOG, COG, NR, NT, PFAM和KEGG等数据库获得基因注释信息,筛选鉴定出化学感受相关基因;使用TPM(transcripts per million)评估化学感受相关基因的表达量;应用最大似然法构建团花绢野螟化学感受相关基因系统发育树。【结果】团花绢野螟雄成虫触角转录组测序获得52 705 124条unigenes,雌成虫触角转录组测序获得55 391 610条unigenes。通过与NR数据库比对注释,团花绢野螟成虫触角转录组注释unigenes共24 192条,其中与亚洲玉米螟Ostrinia furnacalis的同源序列最多,有10 679条。有14 313条unigenes被注释到204 289条GO功能条目,其中113 387条unigenes注释到生物学进程,70 115条unigenes注释到细胞组分,20 787条unigenes注释到分子功能。有10 721条unigenes注释到KOG数据库25个分类的11 968功能条目。有12 892条unigenes被注释到KEGG数据库5类代谢通路,归属于33个通路,其中注释到信号转导通路的unigenes最多,有1 500条unigenes,进而筛选鉴定到136 个化学感受相关基因,包括31个气味结合蛋白(odorant-binding protein, OBP)基因、 24个化学感受蛋白(chemosensory protein, CSP)基因、 50个气味受体(odorant receptor, OR)基因、 20个离子型受体(ionotropic receptor, IR)基因、 9个味觉受体(gustatory receptor, GR)基因和2个感觉神经元膜蛋白(sensory neuron membrane protein, SNMP)基因。【结论】本研究首次构建了团花绢野螟成虫触角转录组数据库,阐述了化学感受相关基因的种类和数量,为团花绢野螟化学感受基因功能分析及化学感受机制奠定分子基础,进而为基于昆虫化学感受反应机制开发新的绿色防控技术提供理论支撑。

关键词:  , 团花绢野螟; 触角; 转录组; 化学感受相关基因; 生物信息学

Abstract: 【Aim】 This study aims to establish the adult antennal transcriptome database of Diaphania glauculalis and mine chemosensory-related genes, so as to provide a theoretical basis for the chemosensory mechanism of adult antenna of D. glauculalis, and green prevention and control technology. 【Methods】 The antennal transcriptome of D. glauculalis adults was sequenced using an Illumina NovaSeq 6000 platform. The raw data were edited using Trimmomatic and Trinity and assembled to obtain transcriptome data. The transcriptome data were compared to CDD, KOG, COG, NR, NT, PFAM and KEGG databases to obtain gene annotation information and identify the chemosensory-related genes. The expression levels of the chemosensory-related genes were assessed using TPM (transcripts per million). The phylogenetic tree of the chemosensory-related genes of D. glauculalis was constructed using the maximum likelihood method. 【Results】A total of 52 705 124 unigenes were obtained from the male adult antennal transcriptome of D. glauculalis and 55 391 610 unigenes from the female adult antennal transcriptome. By comparing the annotation with NR database, 24 192 unigenes were annotated, among them, the most (10 679) homologous sequences were from Ostrinia furnacalis. There were 14 313 unigenes annotated to 204 289 GO functional entries, including 113 387 unigenes annotated to biological processes, 70 115 unigenes annotated to cellular components, and 20 787 unigenes annotated to molecular functions. There were 10 721 unigenes annotated to 11 968 functional entries in 25 classifications of the KOG database. There were 12 892 unigenes annotated to five categories of metabolic pathways in the KEGG database, attributed to 33 pathways, with the largest number of unigenes (1 500) annotated to signal transduction pathways. A total of 136 chemosensory-related genes were identified, including 31 odorantbinding protein (OBP) genes, 24 chemosensory protein (CSP) genes, 50 odor receptor (OR) genes, 20 ionotropic receptor (IR) genes, nine gustatory receptor (GR) genes and two sensory neuron membrane protein (SNMP) genes. 【Conclusion】 In this study, we constructed the antennal transcriptome database of D. glauculalis adults for the first time, and elaborated the types and number of chemosensory-related genes. This study lays the molecular foundation for the functional analysis of chemosensory genes of D. glauculalis and olfactory sensory mechanism, and then provides theoretical support for the development of new green control technologies based on insect olfactory sensory mechanism.

Key words: Diaphania glauculalis, antenna, transcriptome, chemosensoryrelated genes, bioinformatics